Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | EGT48_19225 | Not Available | Positive | 3801304 - 3802527 | 44395.4 |
| purine-nucleoside phosphorylase | EGT48_19230 | Not Available | Positive | 3802584 - 3803303 | 25937.4 |
| type ii toxin-antitoxin system hipa family toxinoxin yjjj | EGT48_19235 | Not Available | Positive | 3803470 - 3804801 | 49732.4 |
| lipoate--protein ligase lpla | EGT48_19240 | Not Available | Negative | 3804802 - 3805818 | 37931.9 |
| ytjb family periplasmic protein | EGT48_19245 | Not Available | Negative | 3805846 - 3806490 | 24070.2 |
| phosphoserine phosphatase | EGT48_19250 | Not Available | Positive | 3806596 - 3807564 | 35089.8 |
| dna repair protein rada | EGT48_19255 | Not Available | Positive | 3807613 - 3808995 | 49475.0 |
| trifunctional nad biosynthesis/regulator protein nadr | EGT48_19260 | Not Available | Positive | 3809016 - 3810248 | 47350.4 |
| energy-dependent translational throttle protein etta | EGT48_19265 | Not Available | Negative | 3810369 - 3812036 | 62418.4 |
| murein transglycosylase | EGT48_19270 | Not Available | Positive | 3812243 - 3814180 | 73366.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





