Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uxu operon transcriptional regulator | EGT48_18920 | Not Available | Positive | 3743390 - 3744163 | 29291.8 |
| irad leader peptide | EGT48_18930 | Not Available | Positive | 3745682 - 3745765 | 3016.48 |
| anti-adapter protein irad | EGT48_18935 | Not Available | Positive | 3745762 - 3746154 | 14747.7 |
| transcriptional regulator | EGT48_18940 | Not Available | Negative | 3746147 - 3747058 | 34698.6 |
| isoaspartyl dipeptidase | EGT48_18945 | Not Available | Negative | 3747123 - 3748295 | 41059.3 |
| hypothetical protein | EGT48_18950 | Not Available | Negative | 3748308 - 3748769 | 16194.5 |
| hypothetical protein | EGT48_18955 | Not Available | Negative | 3748766 - 3749449 | 23794.8 |
| rna 2'-phosphotransferase | EGT48_18960 | Not Available | Positive | 3749699 - 3750253 | 20558.7 |
| mfs transporter | EGT48_18965 | Not Available | Negative | 3750266 - 3751444 | 41345.3 |
| hypothetical protein | EGT48_18970 | Not Available | Negative | 3751512 - 3752372 | 31983.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





