Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose kinase | EGT48_18710 | Not Available | Positive | 3701217 - 3702476 | 47670.9 |
| s-methyl-5-thioribose-1-phosphate isomerase | EGT48_18715 | Not Available | Positive | 3702486 - 3703601 | 40407.2 |
| l-fuculose-phosphate aldolase | EGT48_18720 | Not Available | Positive | 3703632 - 3704273 | 23199.2 |
| multidrug dmt transporter permease | EGT48_18725 | Not Available | Positive | 3704377 - 3705381 | 35792.6 |
| transcriptional regulator | EGT48_18730 | Not Available | Negative | 3705422 - 3706408 | 36113.8 |
| gluconate permease | EGT48_18735 | Not Available | Negative | 3706755 - 3708104 | 47006.8 |
| yjhg/yagf family d-xylonate dehydratase | EGT48_18740 | Not Available | Negative | 3708211 - 3710178 | 69960.9 |
| dihydrodipicolinate synthase family protein | EGT48_18745 | Not Available | Negative | 3710189 - 3711094 | 32723.5 |
| iclr family transcriptional regulator | EGT48_18750 | Not Available | Negative | 3711099 - 3711887 | 29892.4 |
| deor/glpr transcriptional regulator | EGT48_18755 | Not Available | Negative | 3712190 - 3712972 | 29241.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





