Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EGT48_18595 | Not Available | Positive | 3679887 - 3680804 | 36177.6 |
| gtpase family protein | EGT48_18600 | Not Available | Positive | 3680889 - 3681761 | 32493.8 |
| autotransporter adhesin ag43 | EGT48_18605 | Not Available | Positive | 3682134 - 3684980 | 97278.1 |
| duf905 domain-containing protein | EGT48_18610 | Not Available | Positive | 3685051 - 3685209 | 5915.98 |
| cytoplasmic protein | EGT48_18615 | Not Available | Positive | 3685209 - 3685343 | 5062.03 |
| duf945 domain-containing protein | EGT48_18620 | Not Available | Positive | 3685364 - 3686182 | 31270.5 |
| antirestriction protein | EGT48_18630 | Not Available | Positive | 3686524 - 3686997 | 17918.2 |
| dna repair protein radc | EGT48_18635 | Not Available | Positive | 3687013 - 3687489 | 17688.4 |
| duf987 domain-containing protein | EGT48_18640 | Not Available | Positive | 3687552 - 3687773 | 8409.23 |
| type iv toxin-antitoxin system yeeu family antitoxin | EGT48_18645 | Not Available | Positive | 3687936 - 3688304 | 13625.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





