Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inovirus gp2 family protein | EGT48_18545 | Not Available | Negative | 3675560 - 3676129 | 21842.2 |
| hypothetical protein | EGT48_18550 | Not Available | Positive | 3676329 - 3676526 | 7249.25 |
| hypothetical protein | EGT48_18555 | Not Available | Negative | 3676639 - 3676839 | 7657.98 |
| hemolysin activation protein | EGT48_18560 | Not Available | Negative | 3676859 - 3677008 | 5700.86 |
| hypothetical protein | EGT48_18565 | Not Available | Positive | 3677579 - 3677785 | 7856.57 |
| helix-turn-helix domain-containing protein | EGT48_18570 | Not Available | Positive | 3677782 - 3677988 | 7866.61 |
| hypothetical protein | EGT48_18575 | Not Available | Positive | 3678084 - 3678686 | 23653.4 |
| hypothetical protein | EGT48_18580 | Not Available | Negative | 3678592 - 3678789 | 7162.34 |
| hypothetical protein | EGT48_18585 | Not Available | Positive | 3678858 - 3679055 | 7139.53 |
| hypothetical protein | EGT48_18590 | Not Available | Negative | 3679539 - 3679754 | 7926.72 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





