Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | EGT48_18430 | Not Available | Negative | 3653959 - 3654615 | 24596.0 |
| duf2254 domain-containing protein | EGT48_18435 | Not Available | Negative | 3654863 - 3656140 | 47011.3 |
| choline transporter | EGT48_18440 | Not Available | Negative | 3656100 - 3656258 | 6089.0 |
| bcct family transporter | EGT48_18445 | Not Available | Negative | 3656203 - 3658200 | 73673.4 |
| is3 family transposase | EGT48_18450 | Not Available | Negative | 3658355 - 3659511 | 44480.2 |
| hypothetical protein | EGT48_18460 | Not Available | Positive | 3660445 - 3660702 | 9465.12 |
| fe(3+) dicitrate transport atp-binding protein fece | EGT48_18465 | Not Available | Negative | 3661259 - 3662026 | 28192.5 |
| fe(3+) dicitrate abc transporter permease subunit fecd | EGT48_18470 | Not Available | Negative | 3662027 - 3662983 | 34152.7 |
| fe3+ dicitrate abc transporter permease | EGT48_18475 | Not Available | Negative | 3662980 - 3663978 | 34894.9 |
| fe(3+)-dicitrate abc transporter substrate-binding protein fecb | EGT48_18480 | Not Available | Negative | 3663975 - 3664877 | 33108.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





