Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | EGT48_18060 | Not Available | Negative | 3584215 - 3584853 | 23316.3 |
| translocation and assembly module tama | EGT48_18065 | Not Available | Positive | 3585059 - 3586792 | 64799.7 |
| autotransporter assembly complex protein tamb | EGT48_18070 | Not Available | Positive | 3586789 - 3590568 | 136894.0 |
| gamma-glutamylcyclotransferase ytfp | EGT48_18075 | Not Available | Positive | 3590571 - 3590912 | 12867.2 |
| antitoxin chps | EGT48_18080 | Not Available | Positive | 3591124 - 3591375 | 9272.12 |
| type ii toxin-antitoxin system chpb family toxin | EGT48_18085 | Not Available | Positive | 3591369 - 3591719 | 12512.2 |
| inorganic pyrophosphatase | EGT48_18090 | Not Available | Negative | 3591799 - 3592329 | 19704.6 |
| abc transporter substrate-binding protein | EGT48_18095 | Not Available | Positive | 3592639 - 3593595 | 34314.5 |
| sugar abc transporter atp-binding protein | EGT48_18100 | Not Available | Positive | 3593735 - 3595237 | 55245.4 |
| abc transporter permease | EGT48_18105 | Not Available | Positive | 3595251 - 3596273 | 35479.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





