Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quaternary ammonium compound-resistance protein suge | EGT48_17660 | Not Available | Positive | 3512100 - 3512417 | 10901.0 |
| hypothetical protein | EGT48_17665 | Not Available | Negative | 3512414 - 3512947 | 19924.7 |
| blaec family class c beta-lactamase | EGT48_17670 | Not Available | Negative | 3513036 - 3514169 | 41686.1 |
| fumarate reductase subunit frdd | EGT48_17675 | Not Available | Negative | 3514232 - 3514591 | 13107.8 |
| fumarate reductase subunit frdc | EGT48_17680 | Not Available | Negative | 3514602 - 3514997 | 15015.8 |
| fumarate reductase iron-sulfur subunit | EGT48_17685 | Not Available | Negative | 3515008 - 3515742 | 27124.5 |
| fumarate reductase (quinol) flavoprotein subunit | EGT48_17690 | Not Available | Negative | 3515735 - 3517543 | 65993.5 |
| elongation factor p--(r)-beta-lysine ligase | EGT48_17695 | Not Available | Positive | 3517868 - 3518845 | 36978.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | EGT48_17700 | Not Available | Positive | 3519064 - 3520566 | 54718.2 |
| duf2645 family protein | EGT48_17705 | Not Available | Positive | 3520664 - 3520978 | 12564.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





