Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux transporter outer membrane subunit mdtp | EGT48_17260 | Not Available | Negative | 3421856 - 3423322 | 53482.3 |
| multidrug efflux transporter permease subunit mdto | EGT48_17265 | Not Available | Negative | 3423319 - 3425370 | 76235.3 |
| multidrug transporter subunit mdtn | EGT48_17270 | Not Available | Negative | 3425370 - 3426401 | 36924.3 |
| hypothetical protein | EGT48_17275 | Not Available | Negative | 3426420 - 3426695 | 10265.2 |
| alkyl/aryl-sulfatase | EGT48_17280 | Not Available | Negative | 3426904 - 3428889 | 73237.0 |
| allose kinase | EGT48_17285 | Not Available | Negative | 3429162 - 3430091 | 33809.8 |
| ribulose-phosphate 3-epimerase | EGT48_17290 | Not Available | Negative | 3430075 - 3430770 | 26081.7 |
| d-allose abc transporter permease | EGT48_17295 | Not Available | Negative | 3430781 - 3431761 | 34303.8 |
| d-allose abc transporter atp-binding protein alsa | EGT48_17300 | Not Available | Negative | 3431740 - 3433272 | 56832.4 |
| d-allose transporter substrate-binding protein | EGT48_17305 | Not Available | Negative | 3433400 - 3434335 | 32927.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





