Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase nrfefg subunit nrff | EGT48_17210 | Not Available | Positive | 3410145 - 3410528 | 14589.0 |
| heme lyase nrfefg subunit nrfg | EGT48_17215 | Not Available | Positive | 3410525 - 3411121 | 22771.5 |
| glutamate/aspartate:proton symporter gltp | EGT48_17220 | Not Available | Positive | 3411464 - 3412777 | 47166.1 |
| sel1 repeat family protein | EGT48_17225 | Not Available | Negative | 3413266 - 3413955 | 25110.5 |
| abc transporter atp-binding protein | EGT48_17230 | Not Available | Negative | 3414066 - 3414770 | 26419.0 |
| abc transporter atp-binding protein | EGT48_17235 | Not Available | Negative | 3414757 - 3415593 | 31072.8 |
| abc transporter permease | EGT48_17240 | Not Available | Negative | 3415586 - 3416419 | 30128.9 |
| abc transporter permease | EGT48_17245 | Not Available | Negative | 3416419 - 3417468 | 37981.1 |
| abc transporter substrate-binding protein | EGT48_17250 | Not Available | Negative | 3417568 - 3419136 | 57079.1 |
| formate dehydrogenase h subunit alpha, selenocysteine-containing | EGT48_17255 | Not Available | Negative | 3419511 - 3421658 | 79257.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





