Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | EGT48_17060 | Not Available | Positive | 3377569 - 3378738 | 42282.2 |
| succinate--coa ligase subunit alpha | EGT48_17065 | Not Available | Positive | 3378751 - 3379623 | 30673.3 |
| dass family sodium-coupled anion symporter | EGT48_17070 | Not Available | Positive | 3379835 - 3381334 | 52778.6 |
| ldh family oxidoreductase | EGT48_17075 | Not Available | Positive | 3381346 - 3382419 | 38309.8 |
| sigma-54-dependent fis family transcriptional regulator | EGT48_17080 | Not Available | Negative | 3382408 - 3383766 | 51090.0 |
| sensor histidine kinase | EGT48_17085 | Not Available | Negative | 3383759 - 3385579 | 69235.1 |
| acid phosphatase apha | EGT48_17090 | Not Available | Positive | 3385856 - 3386569 | 26076.9 |
| thiamine phosphate synthase | EGT48_17095 | Not Available | Positive | 3386680 - 3387096 | 15626.7 |
| mmcq/yjbr family dna-binding protein | EGT48_17100 | Not Available | Positive | 3387100 - 3387456 | 13546.3 |
| excinuclease abc subunit a | EGT48_17105 | Not Available | Negative | 3387491 - 3390313 | 103876.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





