Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl coa:acetate/3-ketoacid coa transferase | EGT48_17010 | Not Available | Negative | 3363667 - 3365238 | 56246.5 |
| laci family dna-binding transcriptional regulator | EGT48_17015 | Not Available | Positive | 3365494 - 3366528 | 37856.3 |
| replicative dna helicase dnab | EGT48_17020 | Not Available | Positive | 3366601 - 3368016 | 52454.1 |
| alanine racemase | EGT48_17025 | Not Available | Positive | 3368069 - 3369148 | 39138.2 |
| nicotinamide riboside transporter pnuc | EGT48_17030 | Not Available | Positive | 3369171 - 3369728 | 21330.2 |
| atpase | EGT48_17035 | Not Available | Positive | 3369725 - 3370729 | 38069.5 |
| aromatic amino acid transaminase | EGT48_17040 | Not Available | Positive | 3370811 - 3372004 | 43602.2 |
| 2-oxoglutarate dehydrogenase e1 component | EGT48_17045 | Not Available | Positive | 3372186 - 3374930 | 102372.0 |
| dihydrolipoyllysine-residue succinyltransferase | EGT48_17050 | Not Available | Positive | 3374963 - 3376117 | 42162.0 |
| dihydrolipoyl dehydrogenase | EGT48_17055 | Not Available | Positive | 3376129 - 3377547 | 49871.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





