Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | EGT48_16685 | Not Available | Positive | 3292998 - 3293771 | 29704.6 |
| uroporphyrinogen decarboxylase | EGT48_16690 | Not Available | Positive | 3293811 - 3294875 | 39236.4 |
| deoxyribonuclease v | EGT48_16695 | Not Available | Positive | 3294885 - 3295556 | 24732.0 |
| duf416 family protein | EGT48_16700 | Not Available | Positive | 3295599 - 3296189 | 22523.8 |
| dna-binding protein hu-alpha | EGT48_16705 | Not Available | Positive | 3296376 - 3296648 | 9535.51 |
| duf1481 domain-containing protein | EGT48_16710 | Not Available | Positive | 3296661 - 3297356 | 26308.9 |
| zinc resistance-associated protein | EGT48_16715 | Not Available | Negative | 3297358 - 3297777 | 15042.1 |
| two-component system sensor histidine kinase zras | EGT48_16720 | Not Available | Positive | 3298015 - 3299391 | 50348.9 |
| two-component system response regulator zrar | EGT48_16725 | Not Available | Positive | 3299388 - 3300713 | 48413.4 |
| phosphoribosylamine--glycine ligase | EGT48_16730 | Not Available | Negative | 3300710 - 3301999 | 45929.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





