Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid scaffolding protein | EGT48_23995 | Not Available | Negative | 4792038 - 4792874 | 30721.1 |
| Helix-turn-helix domain-containing protein | EGT48_24000 | Not Available | Positive | 4793029 - 4794780 | 66831.5 |
| Pbsx family portal protein | EGT48_24005 | Not Available | Positive | 4794780 - 4795826 | 39275.1 |
| hypothetical protein | EGT48_24010 | Not Available | Negative | 4795841 - 4796365 | 19778.4 |
| duf4760 domain-containing protein | EGT48_24015 | Not Available | Positive | 4797089 - 4797586 | 19385.5 |
| hypothetical protein | EGT48_24020 | Not Available | Positive | 4797626 - 4798468 | 32951.1 |
| Plasmid partitioning/stability family protein | EGT48_24025 | Not Available | Negative | 4798552 - 4798866 | 11939.2 |
| Recombinase | EGT48_24030 | Not Available | Negative | 4798871 - 4799830 | 35024.9 |
| Replication protein | EGT48_24035 | Not Available | Negative | 4799907 - 4802729 | 106871.0 |
| Hypothetical protein | EGT48_24040 | Not Available | Negative | 4802736 - 4803101 | 13799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





