Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1287 domain-containing protein | EGT48_16420 | Not Available | Negative | 3231989 - 3232606 | 22945.2 |
| glycerol dehydrogenase | EGT48_16425 | Not Available | Negative | 3232882 - 3233985 | 38714.4 |
| fructose-6-phosphate aldolase | EGT48_16430 | Not Available | Negative | 3233996 - 3234658 | 23543.7 |
| phosphoenolpyruvate--protein phosphotransferase | EGT48_16435 | Not Available | Negative | 3234670 - 3237171 | 91815.9 |
| pts fructose transporter subunit eiic | EGT48_16440 | Not Available | Positive | 3237480 - 3238559 | 37074.7 |
| fructose-like phosphotransferase enzyme iib component 2 | EGT48_16445 | Not Available | Positive | 3238574 - 3238894 | 11248.6 |
| formate c-acetyltransferase | EGT48_16450 | Not Available | Positive | 3238945 - 3241242 | 85886.7 |
| [formate-c-acetyltransferase]-activating enzyme | EGT48_16455 | Not Available | Positive | 3241208 - 3242086 | 32412.5 |
| pts fructose-like transporter subunit iib | EGT48_16460 | Not Available | Positive | 3242088 - 3242429 | 12652.3 |
| arac family transcriptional regulator | EGT48_16465 | Not Available | Negative | 3242416 - 3243267 | 32125.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





