Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | EGT48_16370 | Not Available | Positive | 3219272 - 3219484 | 7871.49 |
| yiix family permuted papain-like enzyme | EGT48_16375 | Not Available | Negative | 3219545 - 3220153 | 23132.8 |
| met repressor | EGT48_16380 | Not Available | Negative | 3220213 - 3220530 | 12141.4 |
| cystathionine gamma-synthase | EGT48_16385 | Not Available | Positive | 3220807 - 3221967 | 41582.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | EGT48_16390 | Not Available | Positive | 3221970 - 3224402 | 88935.8 |
| cytoplasmic protein | EGT48_16395 | Not Available | Negative | 3224366 - 3225496 | 43140.4 |
| bifunctional metallophosphatase/5'-nucleotidase | EGT48_16400 | Not Available | Positive | 3225629 - 3227182 | 56582.8 |
| methylenetetrahydrofolate reductase | EGT48_16405 | Not Available | Positive | 3227564 - 3228454 | 33100.6 |
| catalase/peroxidase hpi | EGT48_16410 | Not Available | Positive | 3228783 - 3230963 | 80029.9 |
| dmt family transporter | EGT48_16415 | Not Available | Positive | 3231057 - 3231962 | 32867.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





