Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator rhas | EGT48_16220 | Not Available | Positive | 3189894 - 3190730 | 32245.1 |
| hth-type transcriptional activator rhar | EGT48_16225 | Not Available | Positive | 3190714 - 3191652 | 35628.3 |
| l-rhamnose/proton symporter rhat | EGT48_16230 | Not Available | Negative | 3191649 - 3192683 | 37286.1 |
| superoxide dismutase | EGT48_16235 | Not Available | Positive | 3192968 - 3193588 | 23051.1 |
| 2-keto-3-deoxygluconate permease | EGT48_16240 | Not Available | Positive | 3193848 - 3194831 | 33671.4 |
| 6-n-hydroxylaminopurine resistance protein | EGT48_16245 | Not Available | Positive | 3194980 - 3195654 | 25339.1 |
| two-component sensor histidine kinase | EGT48_16250 | Not Available | Negative | 3195825 - 3197198 | 51627.3 |
| envelope stress response regulator transcription factor cpxr | EGT48_16255 | Not Available | Negative | 3197195 - 3197893 | 26315.7 |
| periplasmic protein cpxp | EGT48_16260 | Not Available | Positive | 3198043 - 3198543 | 18966.4 |
| cation-efflux pump fief | EGT48_16265 | Not Available | Positive | 3198692 - 3199594 | 32915.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





