Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EGT48_16110 | Not Available | Positive | 3169929 - 3170918 | 37096.5 |
| alpha/beta hydrolase | EGT48_16115 | Not Available | Negative | 3170982 - 3171890 | 33608.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EGT48_16120 | Not Available | Positive | 3172119 - 3172430 | 12203.9 |
| helix-turn-helix domain-containing protein | EGT48_16125 | Not Available | Positive | 3172431 - 3172721 | 10847.1 |
| hypothetical protein | EGT48_16130 | Not Available | Positive | 3172806 - 3173018 | 8267.17 |
| hypothetical protein | EGT48_16135 | Not Available | Positive | 3173080 - 3173358 | 11130.1 |
| ribbon-helix-helix protein, copg family | EGT48_16145 | Not Available | Positive | 3173755 - 3173973 | 8564.31 |
| hypothetical protein | EGT48_16150 | Not Available | Negative | 3174158 - 3174607 | 17456.6 |
| hypothetical protein | EGT48_16155 | Not Available | Negative | 3174923 - 3175771 | 33325.5 |
| hypothetical protein | EGT48_16160 | Not Available | Positive | 3176061 - 3176303 | 9273.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





