Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | EGT48_16060 | Not Available | Negative | 3160162 - 3161058 | 31708.6 |
| sulfolactaldehyde 3-reductase | EGT48_16065 | Not Available | Positive | 3161231 - 3162109 | 30490.1 |
| aldolase | EGT48_16070 | Not Available | Positive | 3162134 - 3163021 | 31713.5 |
| zn-dependent alcohol dehydrogenase | EGT48_16075 | Not Available | Positive | 3163054 - 3164064 | 35966.8 |
| mfs transporter | EGT48_16080 | Not Available | Positive | 3164134 - 3165567 | 50742.8 |
| mfs transporter | EGT48_16085 | Not Available | Positive | 3165666 - 3167015 | 49211.9 |
| aldose 1-epimerase | EGT48_16090 | Not Available | Positive | 3167005 - 3167892 | 33038.2 |
| glucose-1-phosphatase | EGT48_16095 | Not Available | Positive | 3168033 - 3168632 | 22817.2 |
| virulence factor brkb family protein | EGT48_16100 | Not Available | Positive | 3168626 - 3169498 | 32840.7 |
| d-aminoacyl-trna deacylase | EGT48_16105 | Not Available | Positive | 3169495 - 3169932 | 15937.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





