Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tatb | EGT48_15890 | Not Available | Positive | 3121783 - 3122298 | 18479.9 |
| sec-independent protein translocase subunit tatc | EGT48_15895 | Not Available | Positive | 3122301 - 3123077 | 28893.9 |
| 3'-5' ssdna/rna exonuclease tatd | EGT48_15900 | Not Available | Positive | 3123119 - 3123901 | 28978.6 |
| transcription/translation regulatory transformer protein rfah | EGT48_15905 | Not Available | Negative | 3123898 - 3124386 | 18357.3 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | EGT48_15910 | Not Available | Positive | 3124553 - 3126046 | 55606.8 |
| nad(p)h-flavin reductase | EGT48_15915 | Not Available | Positive | 3126092 - 3126793 | 26243.5 |
| acetyl-coa c-acyltransferase fada | EGT48_15920 | Not Available | Negative | 3126974 - 3128137 | 40825.6 |
| fatty acid oxidation complex subunit alpha fadb | EGT48_15925 | Not Available | Negative | 3128147 - 3130336 | 79625.6 |
| xaa-pro dipeptidase | EGT48_15930 | Not Available | Positive | 3130526 - 3131857 | 50178.9 |
| impact family protein | EGT48_15935 | Not Available | Positive | 3131857 - 3132471 | 21690.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





