Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium/nickel/cobalt transporter cora | EGT48_15690 | Not Available | Positive | 3080592 - 3081542 | 36591.8 |
| duf2628 domain-containing protein | EGT48_15695 | Not Available | Negative | 3081585 - 3081965 | 14925.2 |
| hypothetical protein | EGT48_15700 | Not Available | Negative | 3081980 - 3082396 | 15930.1 |
| eama family transporter rard | EGT48_15705 | Not Available | Negative | 3082455 - 3083345 | 33297.1 |
| thioesterase family protein | EGT48_15710 | Not Available | Negative | 3083397 - 3083864 | 17163.8 |
| phospholipase a | EGT48_15715 | Not Available | Positive | 3084029 - 3084898 | 33108.7 |
| atp-dependent dna helicase recq | EGT48_15720 | Not Available | Positive | 3085023 - 3086852 | 68298.5 |
| threonine export protein rhtc | EGT48_15725 | Not Available | Positive | 3086917 - 3087537 | 22508.5 |
| rpn family recombination-promoting nuclease/putative transposase | EGT48_15730 | Not Available | Negative | 3087575 - 3088435 | 33025.1 |
| homoserine/homoserine lactone efflux protein | EGT48_15735 | Not Available | Negative | 3088594 - 3089214 | 22428.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





