Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 3025834 - 3027387 | Not Available |
| transcriptional regulator | EGT48_15420 | Not Available | Negative | 3025727 - 3026566 | 31792.1 |
| duf413 domain-containing protein | EGT48_15425 | Not Available | Positive | 3026685 - 3027023 | 13134.2 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3027812 - 3030736 | Not Available |
| atp-dependent protease | EGT48_15430 | Not Available | Negative | 3027048 - 3028568 | 55268.7 |
| ilvgmeda operon leader peptide | EGT48_15435 | Not Available | Positive | 3028921 - 3029019 | 3231.32 |
| hypothetical protein | EGT48_15440 | Not Available | Positive | 3029106 - 3029156 | 1910.25 |
| acetolactate synthase 2 catalytic subunit | EGT48_15445 | Not Available | Positive | 3029159 - 3030805 | 59180.2 |
| acetolactate synthase isozyme 2 small subunit | EGT48_15450 | Not Available | Positive | 3030802 - 3031065 | 9703.74 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3030827 - 3030942 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





