Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity tryptophan permease tnab | EGT48_15150 | Not Available | Positive | 2968926 - 2970173 | 45273.3 |
| multidrug efflux mfs transporter mdtl | EGT48_15155 | Not Available | Positive | 2970305 - 2971480 | 41439.1 |
| hth-type transcriptional regulator yidz | EGT48_15160 | Not Available | Positive | 2971455 - 2972414 | 36943.9 |
| hypothetical protein | EGT48_15165 | Not Available | Positive | 2972571 - 2973320 | 27648.2 |
| chromate reductase | EGT48_15170 | Not Available | Positive | 2973342 - 2973908 | 20362.8 |
| ncs2 family permease | EGT48_15175 | Not Available | Negative | 2973961 - 2975298 | 46815.7 |
| 6-phosphogluconate phosphatase | EGT48_15180 | Not Available | Positive | 2975465 - 2976130 | 24793.9 |
| hypothetical protein | EGT48_15185 | Not Available | Positive | 2976197 - 2976664 | 16710.4 |
| hypothetical protein | EGT48_15190 | Not Available | Positive | 2976713 - 2977300 | 22405.9 |
| glucosamine-6-phosphate deaminase | EGT48_15195 | Not Available | Negative | 2977361 - 2978083 | 26350.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





