Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2896779 - 2898332 | Not Available |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | EGT48_14805 | Not Available | Positive | 2898117 - 2898806 | 25360.6 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2898666 - 2901590 | Not Available |
| atp-dependent dna helicase recg | EGT48_14810 | Not Available | Positive | 2898812 - 2900893 | 76529.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2901681 - 2901796 | Not Available |
| sodium/glutamate symport carrier protein | EGT48_14815 | Not Available | Negative | 2900927 - 2902132 | 42445.9 |
| xanthine permease xanp | EGT48_14820 | Not Available | Positive | 2902412 - 2903803 | 48871.2 |
| asma family protein | EGT48_14825 | Not Available | Positive | 2903924 - 2905633 | 62237.9 |
| d-lyxose/d-mannose family sugar isomerase | EGT48_14830 | Not Available | Negative | 2905677 - 2906357 | 26151.1 |
| rok family protein | EGT48_14835 | Not Available | Negative | 2906338 - 2907270 | 32958.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





