Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptose(i) kinase rfap | EGT48_14705 | Not Available | Negative | 2879841 - 2880638 | 31137.3 |
| glycosyltransferase family 1 protein | EGT48_14710 | Not Available | Negative | 2880631 - 2881755 | 42558.7 |
| lipopolysaccharide core heptosyltransferase rfaq | EGT48_14715 | Not Available | Negative | 2881752 - 2882810 | 39475.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | EGT48_14720 | Not Available | Positive | 2883224 - 2884501 | 47293.9 |
| pantetheine-phosphate adenylyltransferase | EGT48_14725 | Not Available | Positive | 2884509 - 2884988 | 17953.8 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EGT48_14730 | Not Available | Negative | 2885027 - 2885836 | 30261.8 |
| 50s ribosomal protein l33 | EGT48_14735 | Not Available | Negative | 2885934 - 2886101 | 6371.94 |
| 50s ribosomal protein l28 | EGT48_14740 | Not Available | Negative | 2886122 - 2886358 | 9007.02 |
| jab domain-containing protein | EGT48_14745 | Not Available | Negative | 2886575 - 2887243 | 25288.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EGT48_14750 | Not Available | Positive | 2887415 - 2888635 | 43373.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





