Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EGT48_14555 | Not Available | Negative | 2846577 - 2846786 | 8039.8 |
| yibl family ribosome-associated protein | EGT48_14560 | Not Available | Positive | 2847070 - 2847432 | 13696.8 |
| duf3251 domain-containing protein | EGT48_14565 | Not Available | Positive | 2847976 - 2848656 | 25520.8 |
| adhesin | EGT48_14570 | Not Available | Positive | 2848700 - 2853043 | 145913.0 |
| l-lactate permease | EGT48_14575 | Not Available | Positive | 2853461 - 2855116 | 59219.6 |
| transcriptional regulator lldr | EGT48_14580 | Not Available | Positive | 2855116 - 2855892 | 29195.9 |
| alpha-hydroxy-acid oxidizing enzyme | EGT48_14585 | Not Available | Positive | 2855889 - 2857079 | 42716.6 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | EGT48_14590 | Not Available | Positive | 2857127 - 2857600 | 17727.3 |
| serine o-acetyltransferase | EGT48_14595 | Not Available | Negative | 2857653 - 2858474 | 29318.4 |
| glycerol-3-phosphate dehydrogenase (nad(p)(+)) | EGT48_14600 | Not Available | Negative | 2858554 - 2859573 | 36363.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





