Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate transporter large permease yian | EGT48_14455 | Not Available | Positive | 2821329 - 2822804 | 52995.3 |
| trap transporter substrate-binding protein | EGT48_14460 | Not Available | Positive | 2822817 - 2823803 | 36041.2 |
| carbohydrate kinase | EGT48_14465 | Not Available | Positive | 2823807 - 2825303 | 55184.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | EGT48_14470 | Not Available | Positive | 2825300 - 2825962 | 23521.1 |
| l-ribulose-5-phosphate 3-epimerase | EGT48_14475 | Not Available | Positive | 2825955 - 2826815 | 32478.9 |
| l-ribulose-5-phosphate 4-epimerase | EGT48_14480 | Not Available | Positive | 2826809 - 2827504 | 25570.5 |
| arac family transcriptional regulator | EGT48_14485 | Not Available | Negative | 2827536 - 2828351 | 31521.1 |
| mfs transporter | EGT48_14490 | Not Available | Positive | 2828577 - 2829977 | 51528.1 |
| glycoside hydrolase family 127 protein | EGT48_14495 | Not Available | Positive | 2829988 - 2831961 | 75329.3 |
| aldehyde dehydrogenase | EGT48_14500 | Not Available | Negative | 2832138 - 2833676 | 56365.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





