Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylr family transcriptional regulator | EGT48_14405 | Not Available | Positive | 2810972 - 2812150 | 44871.7 |
| protein bax | EGT48_14410 | Not Available | Negative | 2812258 - 2813082 | 30869.3 |
| alpha-amylase | EGT48_14415 | Not Available | Positive | 2813402 - 2815432 | 75739.4 |
| valine--pyruvate transaminase | EGT48_14420 | Not Available | Positive | 2815610 - 2816863 | 46715.9 |
| 4fe-4s dicluster domain-containing protein | EGT48_14425 | Not Available | Negative | 2816902 - 2817375 | 17363.1 |
| iclr family transcriptional regulator yiaj | EGT48_14430 | Not Available | Negative | 2817477 - 2818325 | 31083.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | EGT48_14435 | Not Available | Positive | 2818526 - 2819524 | 36522.8 |
| yhch/yjgk/yial family protein | EGT48_14440 | Not Available | Positive | 2819536 - 2820000 | 17376.8 |
| duf4862 family protein | EGT48_14445 | Not Available | Positive | 2820023 - 2820943 | 34359.8 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | EGT48_14450 | Not Available | Positive | 2821057 - 2821524 | 17270.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





