Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2782286 - 2783839 | Not Available |
| peptide abc transporter permease | EGT48_14265 | Not Available | Negative | 2781426 - 2782328 | 32310.5 |
| peptide abc transporter permease | EGT48_14270 | Not Available | Negative | 2782338 - 2783357 | 37499.4 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2784173 - 2787095 | Not Available |
| periplasmic dipeptide transporter | EGT48_14280 | Not Available | Negative | 2783664 - 2785271 | 60296.9 |
| Trna-pro | Not Available | Not Available | Positive | 2786015 - 2786091 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2787186 - 2787301 | Not Available |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | EGT48_14290 | Not Available | Negative | 2786183 - 2787874 | 63864.0 |
| mfs transporter | EGT48_14295 | Not Available | Negative | 2788198 - 2789406 | 42887.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | EGT48_14300 | Not Available | Negative | 2789635 - 2790333 | 25932.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





