Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | EGT48_14100 | Not Available | Positive | 2737040 - 2740153 | 111550.0 |
| transcriptional regulator | EGT48_14110 | Not Available | Negative | 2741612 - 2742436 | 31308.3 |
| glutamate decarboxylase alpha | EGT48_14115 | Not Available | Negative | 2742804 - 2744204 | 52688.0 |
| cytochrome-c peroxidase | EGT48_14120 | Not Available | Negative | 2744415 - 2745812 | 51572.4 |
| trehalase | EGT48_14125 | Not Available | Positive | 2746217 - 2747866 | 63727.1 |
| dna-binding response regulator | EGT48_14130 | Not Available | Negative | 2747917 - 2748519 | 22614.6 |
| lysr family transcriptional regulator | EGT48_14135 | Not Available | Positive | 2749039 - 2749938 | 33321.5 |
| inner membrane protein yhjd | EGT48_14140 | Not Available | Positive | 2749986 - 2750999 | 37888.5 |
| mfs transporter | EGT48_14145 | Not Available | Positive | 2751392 - 2752714 | 47213.9 |
| asma family protein | EGT48_14150 | Not Available | Negative | 2752893 - 2754953 | 74448.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





