Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage inducible protein | EGT48_13990 | Not Available | Negative | 2719542 - 2719625 | 3036.03 |
| arsenate reductase (glutaredoxin) | EGT48_13995 | Not Available | Positive | 2719960 - 2720385 | 15873.2 |
| outer membrane lipoprotein slp | EGT48_14005 | Not Available | Positive | 2721571 - 2722137 | 20949.1 |
| helix-turn-helix transcriptional regulator | EGT48_14010 | Not Available | Positive | 2722290 - 2722820 | 20422.5 |
| hemin-degrading factor | EGT48_14015 | Not Available | Negative | 2722877 - 2723905 | 38612.8 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | EGT48_14020 | Not Available | Negative | 2723954 - 2725936 | 72491.0 |
| hypothetical protein | EGT48_14025 | Not Available | Positive | 2725842 - 2726033 | 7010.53 |
| hemin abc transporter substrate-binding protein | EGT48_14035 | Not Available | Positive | 2726620 - 2727534 | 32910.2 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | EGT48_14040 | Not Available | Positive | 2727554 - 2728891 | 49573.2 |
| heme utilization cystosolic carrier protein hutx | EGT48_14045 | Not Available | Positive | 2728904 - 2729398 | 18287.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





