Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EGT48_13880 | Not Available | Positive | 2695721 - 2696467 | 28407.3 |
| pts sugar transporter subunit iia | EGT48_13885 | Not Available | Positive | 2696492 - 2696965 | 17409.3 |
| pts sugar transporter subunit iib | EGT48_13890 | Not Available | Positive | 2696962 - 2697243 | 9823.0 |
| pts galactitol transporter subunit iic | EGT48_13895 | Not Available | Positive | 2697320 - 2698678 | 48803.4 |
| carbohydrate kinase | EGT48_13900 | Not Available | Positive | 2698671 - 2700179 | 55717.8 |
| hpr family phosphocarrier protein | EGT48_13905 | Not Available | Positive | 2700169 - 2700438 | 9689.66 |
| class ii aldolase | EGT48_13910 | Not Available | Positive | 2700470 - 2701321 | 31033.3 |
| inner membrane transport permease yhhj | EGT48_13915 | Not Available | Negative | 2701430 - 2702554 | 41032.1 |
| abc transporter atp-binding protein/permease | EGT48_13920 | Not Available | Negative | 2702554 - 2705289 | 100748.0 |
| hlyd family secretion protein | EGT48_13925 | Not Available | Negative | 2705286 - 2706353 | 38732.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





