Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1795 domain-containing protein | EGT48_13830 | Not Available | Positive | 2686488 - 2687045 | 19787.7 |
| mfs transporter | EGT48_13835 | Not Available | Negative | 2687049 - 2688299 | 43448.1 |
| ai-2e family transporter | EGT48_13840 | Not Available | Positive | 2688398 - 2689447 | 38539.8 |
| 4'-phosphopantetheinyl transferase acpt | EGT48_13845 | Not Available | Positive | 2689502 - 2690089 | 21731.9 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | EGT48_13850 | Not Available | Positive | 2690200 - 2691774 | 58814.2 |
| nickel abc transporter permease subunit nikb | EGT48_13855 | Not Available | Positive | 2691774 - 2692718 | 35250.3 |
| nickel abc transporter permease subunit nikc | EGT48_13860 | Not Available | Positive | 2692715 - 2693548 | 30391.9 |
| nickel import atp-binding protein nikd | EGT48_13865 | Not Available | Positive | 2693548 - 2694312 | 26814.1 |
| nickel import atp-binding protein nike | EGT48_13870 | Not Available | Positive | 2694309 - 2695115 | 29726.5 |
| nickel-responsive transcriptional regulator nikr | EGT48_13875 | Not Available | Positive | 2695121 - 2695522 | 15094.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





