Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsx | EGT48_13780 | Not Available | Negative | 2677569 - 2678627 | 38485.8 |
| cell division atp-binding protein ftse | EGT48_13785 | Not Available | Negative | 2678620 - 2679288 | 24440.8 |
| signal recognition particle-docking protein ftsy | EGT48_13790 | Not Available | Negative | 2679291 - 2680787 | 54675.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | EGT48_13795 | Not Available | Positive | 2680937 - 2681533 | 21692.9 |
| duf1145 family protein | EGT48_13800 | Not Available | Positive | 2681523 - 2681792 | 10280.4 |
| duf2500 domain-containing protein | EGT48_13805 | Not Available | Negative | 2681795 - 2682154 | 13529.4 |
| lysoplasmalogenase | EGT48_13810 | Not Available | Positive | 2682295 - 2682921 | 23791.9 |
| zinc/cadmium/mercury/lead-transporting atpase | EGT48_13815 | Not Available | Positive | 2682995 - 2685193 | 76752.1 |
| sulfurtransferase tusa | EGT48_13820 | Not Available | Negative | 2685295 - 2685540 | 9095.09 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | EGT48_13825 | Not Available | Positive | 2685750 - 2686415 | 25285.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





