Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EGT48_13730 | Not Available | Negative | 2668508 - 2669221 | 26297.9 |
| abc transporter atp-binding protein | EGT48_13735 | Not Available | Negative | 2669223 - 2669990 | 28458.8 |
| branched-chain amino acid abc transporter permease | EGT48_13740 | Not Available | Negative | 2669987 - 2671264 | 46272.2 |
| branched-chain amino acid abc transporter permease | EGT48_13745 | Not Available | Negative | 2671261 - 2672187 | 32966.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | EGT48_13750 | Not Available | Negative | 2672235 - 2673344 | 39437.0 |
| aspartate 1-decarboxylase autocleavage activator panm | EGT48_13755 | Not Available | Positive | 2673767 - 2674150 | 14573.4 |
| gnat family n-acetyltransferase | EGT48_13760 | Not Available | Negative | 2674147 - 2674674 | 19674.7 |
| duf1778 domain-containing protein | EGT48_13765 | Not Available | Negative | 2674681 - 2674947 | 9929.96 |
| branched chain amino acid abc transporter substrate-binding protein | EGT48_13770 | Not Available | Negative | 2675096 - 2676199 | 39064.5 |
| rna polymerase sigma factor rpoh | EGT48_13775 | Not Available | Negative | 2676470 - 2677324 | 32470.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





