Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase | EGT48_13630 | Not Available | Negative | 2643925 - 2645220 | 48670.4 |
| glycogen debranching enzyme | EGT48_13635 | Not Available | Negative | 2645238 - 2647211 | 73728.8 |
| glycogen-branching enzyme | EGT48_13640 | Not Available | Negative | 2647208 - 2649394 | 84367.4 |
| aspartate-semialdehyde dehydrogenase | EGT48_13645 | Not Available | Negative | 2649667 - 2650770 | 40033.2 |
| naat family transporter yhgn | EGT48_13650 | Not Available | Positive | 2650962 - 2651555 | 21521.9 |
| dna-processing protein dpra | EGT48_13655 | Not Available | Negative | 2651601 - 2652896 | 47092.6 |
| recq family atp-dependent dna helicase | EGT48_13660 | Not Available | Negative | 2652803 - 2654899 | 77553.3 |
| gluconate transporter | EGT48_13665 | Not Available | Negative | 2655040 - 2656380 | 46447.0 |
| gluconokinase | EGT48_13670 | Not Available | Negative | 2656384 - 2656911 | 19491.3 |
| gntr family transcriptional regulator | EGT48_13675 | Not Available | Negative | 2657050 - 2658045 | 36424.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





