Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp33 family molecular chaperone hslo | EGT48_13475 | Not Available | Positive | 2605238 - 2606116 | 32536.3 |
| transposase | EGT48_13480 | Not Available | Negative | 2606239 - 2607447 | 45630.9 |
| duf4153 domain-containing protein | EGT48_13490 | Not Available | Negative | 2607750 - 2609474 | 64547.0 |
| phosphoenolpyruvate carboxykinase (atp) | EGT48_13495 | Not Available | Positive | 2609852 - 2611474 | 59646.7 |
| two-component system sensor histidine kinase envz | EGT48_13500 | Not Available | Negative | 2611551 - 2612903 | 50365.1 |
| dna-binding response regulator | EGT48_13505 | Not Available | Negative | 2612900 - 2613619 | 27355.3 |
| transcription elongation factor greb | EGT48_13510 | Not Available | Positive | 2613811 - 2614323 | 19958.9 |
| rna-binding transcriptional accessory protein | EGT48_13515 | Not Available | Positive | 2614420 - 2616741 | 85146.8 |
| ferrous iron transporter a | EGT48_13520 | Not Available | Positive | 2617179 - 2617406 | 8371.31 |
| ferrous iron transporter b | EGT48_13525 | Not Available | Positive | 2617423 - 2619744 | 84478.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





