Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prd domain-containing protein | EGT48_13375 | Not Available | Negative | 2586652 - 2587014 | 13515.4 |
| hypothetical protein | EGT48_13380 | Not Available | Negative | 2587031 - 2587936 | 33551.5 |
| hypothetical protein | EGT48_13385 | Not Available | Positive | 2587954 - 2588142 | 7625.66 |
| tryptophan--trna ligase | EGT48_13390 | Not Available | Negative | 2588098 - 2589102 | 37425.9 |
| phosphoglycolate phosphatase | EGT48_13395 | Not Available | Negative | 2589095 - 2589853 | 27389.8 |
| ribulose-phosphate 3-epimerase | EGT48_13400 | Not Available | Negative | 2589846 - 2590523 | 24555.7 |
| adenine-specific dna-methyltransferase | EGT48_13405 | Not Available | Negative | 2590541 - 2591377 | 32087.2 |
| cell division protein damx | EGT48_13410 | Not Available | Negative | 2591484 - 2592770 | 46034.1 |
| 3-dehydroquinate synthase | EGT48_13415 | Not Available | Negative | 2592862 - 2593950 | 38900.3 |
| shikimate kinase | EGT48_13420 | Not Available | Negative | 2594007 - 2594528 | 19539.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





