Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterioferritin-associated ferredoxin | EGT48_13175 | Not Available | Negative | 2547586 - 2547780 | 7363.04 |
| lysozyme | EGT48_13180 | Not Available | Negative | 2547949 - 2550651 | 97521.8 |
| translation elongation factor ef-tu 1 | EGT48_13185 | Not Available | Negative | 2550943 - 2552127 | 43286.1 |
| elongation factor g | EGT48_13190 | Not Available | Negative | 2552198 - 2554312 | 77585.8 |
| 30s ribosomal protein s7 | EGT48_13195 | Not Available | Negative | 2554409 - 2554879 | 17605.4 |
| 30s ribosomal protein s12 | EGT48_13200 | Not Available | Negative | 2554976 - 2555350 | 13737.9 |
| sulfurtransferase complex subunit tusb | EGT48_13205 | Not Available | Negative | 2555476 - 2555763 | 10720.9 |
| sulfurtransferase complex subunit tusc | EGT48_13210 | Not Available | Negative | 2555770 - 2556129 | 13089.8 |
| sulfurtransferase complex subunit tusd | EGT48_13215 | Not Available | Negative | 2556129 - 2556515 | 13611.0 |
| transcriptional regulator | EGT48_13220 | Not Available | Negative | 2556515 - 2557237 | 26822.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





