Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s19 | EGT48_13070 | Not Available | Negative | 2531042 - 2531320 | 10430.9 |
| 50s ribosomal protein l2 | EGT48_13075 | Not Available | Negative | 2531337 - 2532158 | 29862.3 |
| 50s ribosomal protein l23 | EGT48_13080 | Not Available | Negative | 2532176 - 2532478 | 11199.8 |
| 50s ribosomal protein l4 | EGT48_13085 | Not Available | Negative | 2532475 - 2533080 | 22087.8 |
| 50s ribosomal protein l3 | EGT48_13090 | Not Available | Negative | 2533091 - 2533720 | 22244.8 |
| 30s ribosomal protein s10 | EGT48_13095 | Not Available | Negative | 2533753 - 2534064 | 11736.3 |
| general secretion pathway protein gspb | EGT48_13100 | Not Available | Negative | 2534302 - 2534721 | 15806.7 |
| general secretion pathway protein gspa | EGT48_13105 | Not Available | Negative | 2534723 - 2536192 | 55276.1 |
| type ii secretion system protein gspc | EGT48_13110 | Not Available | Positive | 2536372 - 2537187 | 30085.8 |
| type ii secretion system protein gspd | EGT48_13115 | Not Available | Positive | 2537171 - 2539123 | 70732.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





