Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EGT48_12650 | Not Available | Negative | 2458514 - 2458786 | 10796.7 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | EGT48_12655 | Not Available | Negative | 2458878 - 2460845 | 73591.9 |
| p-hydroxybenzoic acid efflux pump subunit aaea | EGT48_12660 | Not Available | Negative | 2460851 - 2461783 | 34762.5 |
| protein aaex | EGT48_12665 | Not Available | Negative | 2461791 - 2461994 | 7847.01 |
| hth-type transcriptional activator aaer | EGT48_12670 | Not Available | Positive | 2462177 - 2463106 | 34518.1 |
| metalloprotease tldd | EGT48_12675 | Not Available | Negative | 2463228 - 2464673 | 51366.2 |
| asma2 domain-containing protein | EGT48_12680 | Not Available | Negative | 2464829 - 2468629 | 138948.0 |
| ribonuclease g | EGT48_12685 | Not Available | Negative | 2468697 - 2470166 | 55367.4 |
| septum formation inhibitor maf | EGT48_12690 | Not Available | Negative | 2470156 - 2470749 | 21414.6 |
| rod shape-determining protein mred | EGT48_12695 | Not Available | Negative | 2470758 - 2471246 | 18788.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





