Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stringent starvation protein a | EGT48_12600 | Not Available | Negative | 2449440 - 2450078 | 24306.3 |
| 30s ribosomal protein s9 | EGT48_12605 | Not Available | Negative | 2450473 - 2450865 | 14857.1 |
| 50s ribosomal protein l13 | EGT48_12610 | Not Available | Negative | 2450881 - 2451309 | 16019.5 |
| cell division protein zape | EGT48_12615 | Not Available | Negative | 2451529 - 2452656 | 43087.2 |
| duf1043 family protein | EGT48_12620 | Not Available | Positive | 2452850 - 2453248 | 14961.7 |
| serine endoprotease degq | EGT48_12625 | Not Available | Positive | 2453402 - 2454769 | 47263.0 |
| serine endoprotease degs | EGT48_12630 | Not Available | Positive | 2454859 - 2455926 | 37656.6 |
| malate dehydrogenase | EGT48_12635 | Not Available | Negative | 2455989 - 2456927 | 32339.2 |
| transcriptional regulator argr | EGT48_12640 | Not Available | Positive | 2457362 - 2457832 | 17009.5 |
| duf1471 domain-containing protein | EGT48_12645 | Not Available | Positive | 2458196 - 2458459 | 9196.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





