Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01212 family radical sam protein | EGT48_12550 | Not Available | Negative | 2435791 - 2436720 | 34551.5 |
| glutamate synthase large subunit | EGT48_12555 | Not Available | Positive | 2437395 - 2441855 | 163320.0 |
| glutamate synthase | EGT48_12560 | Not Available | Positive | 2441868 - 2443286 | 52032.3 |
| yhch/yjgk/yial family protein | EGT48_12565 | Not Available | Negative | 2443354 - 2443818 | 17022.7 |
| rok family protein | EGT48_12570 | Not Available | Negative | 2443815 - 2444690 | 29641.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | EGT48_12575 | Not Available | Negative | 2444687 - 2445376 | 24075.0 |
| mfs transporter | EGT48_12580 | Not Available | Negative | 2445424 - 2446914 | 53573.3 |
| n-acetylneuraminate lyase | EGT48_12585 | Not Available | Negative | 2447023 - 2447916 | 32595.4 |
| transcriptional regulator nanr | EGT48_12590 | Not Available | Negative | 2448038 - 2448829 | 29568.0 |
| stringent starvation protein b | EGT48_12595 | Not Available | Negative | 2448937 - 2449434 | 18247.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





