Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EGT48_12500 | Not Available | Positive | 2426615 - 2427340 | 26802.3 |
| rna polymerase sigma-54 factor | EGT48_12505 | Not Available | Positive | 2427388 - 2428821 | 53996.8 |
| ribosome hibernation promoting factor | EGT48_12510 | Not Available | Positive | 2428844 - 2429131 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | EGT48_12515 | Not Available | Positive | 2429249 - 2429740 | 17934.6 |
| rnase adaptor protein rapz | EGT48_12520 | Not Available | Positive | 2429786 - 2430640 | 32494.2 |
| phosphocarrier protein npr | EGT48_12525 | Not Available | Positive | 2430637 - 2430909 | 9810.71 |
| phop regulatory network protein yrbl | EGT48_12530 | Not Available | Positive | 2431122 - 2431754 | 24346.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EGT48_12535 | Not Available | Negative | 2431751 - 2432479 | 27341.1 |
| glutamine amidotransferase | EGT48_12540 | Not Available | Negative | 2432476 - 2433129 | 22964.9 |
| hybrid sensor histidine kinase/response regulator | EGT48_12545 | Not Available | Negative | 2433359 - 2435695 | 88016.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





