Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box family atp-dependent rna helicase | EGT48_12300 | Not Available | Negative | 2388784 - 2390673 | 70550.5 |
| protein yrbn | EGT48_12305 | Not Available | Negative | 2390666 - 2390746 | 2979.59 |
| lipoprotein nlpi | EGT48_12310 | Not Available | Negative | 2390853 - 2391737 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | EGT48_12315 | Not Available | Negative | 2391846 - 2393981 | 77096.5 |
| 30s ribosomal protein s15 | EGT48_12320 | Not Available | Negative | 2394228 - 2394497 | 10269.4 |
| trna pseudouridine(55) synthase trub | EGT48_12325 | Not Available | Negative | 2394646 - 2395590 | 35089.2 |
| 30s ribosome-binding factor rbfa | EGT48_12330 | Not Available | Negative | 2395590 - 2395991 | 15155.4 |
| translation initiation factor if-2 | EGT48_12335 | Not Available | Negative | 2396155 - 2398827 | 97284.5 |
| transcription termination protein nusa | EGT48_12340 | Not Available | Negative | 2398852 - 2400339 | 54874.0 |
| ribosome maturation factor | EGT48_12345 | Not Available | Negative | 2400367 - 2400819 | 16651.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





