Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | EGT48_12250 | Not Available | Negative | 2381024 - 2381659 | 23225.4 |
| type 1 glutamine amidotransferase | EGT48_12255 | Not Available | Positive | 2381787 - 2382305 | 18815.4 |
| hypothetical protein | EGT48_12260 | Not Available | Negative | 2382285 - 2382728 | 16778.2 |
| giy-yig nuclease family protein | EGT48_12265 | Not Available | Positive | 2382779 - 2383081 | 11272.5 |
| n-acetyltransferase | EGT48_12270 | Not Available | Negative | 2383068 - 2383571 | 18515.8 |
| scp2 domain-containing protein | EGT48_12275 | Not Available | Negative | 2383565 - 2384089 | 19673.0 |
| u32 family peptidase | EGT48_12280 | Not Available | Positive | 2384298 - 2385293 | 37016.1 |
| u32 family peptidase | EGT48_12285 | Not Available | Positive | 2385302 - 2386180 | 32493.0 |
| luciferase-like monooxygenase | EGT48_12290 | Not Available | Positive | 2386261 - 2387268 | 37131.5 |
| tryptophan permease | EGT48_12295 | Not Available | Negative | 2387386 - 2388630 | 44349.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





