Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylgalactosamine-specific phosphotransferase enzyme iib component 1 | EGT48_12200 | Not Available | Positive | 2372369 - 2372845 | 17625.3 |
| n-acetylgalactosamine permease iic component 1 | EGT48_12205 | Not Available | Positive | 2372884 - 2373687 | 28646.5 |
| pts n-acetylgalactosamine transporter subunit iid | EGT48_12210 | Not Available | Positive | 2373677 - 2374468 | 28975.1 |
| galactosamine-6-phosphate isomerase | EGT48_12215 | Not Available | Positive | 2374469 - 2375236 | 28393.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EGT48_12220 | Not Available | Negative | 2375286 - 2376149 | 31464.8 |
| penicillin-binding protein activator | EGT48_12225 | Not Available | Positive | 2376214 - 2378250 | 72766.2 |
| yran family protein | EGT48_12230 | Not Available | Positive | 2378208 - 2378603 | 14798.5 |
| dnaa initiator-associating protein diaa | EGT48_12235 | Not Available | Positive | 2378623 - 2379213 | 21091.4 |
| divisome-associated lipoprotein yrap | EGT48_12240 | Not Available | Positive | 2379223 - 2379798 | 20029.1 |
| permease | EGT48_12245 | Not Available | Negative | 2379911 - 2380951 | 37223.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





