Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate kinase | EGT48_12090 | Not Available | Negative | 2350399 - 2351607 | 43396.7 |
| threonine/serine transporter tdcc | EGT48_12095 | Not Available | Negative | 2351633 - 2352964 | 48895.8 |
| serine/threonine dehydratase | EGT48_12100 | Not Available | Negative | 2352986 - 2353975 | 35234.5 |
| transcriptional regulator tdca | EGT48_12105 | Not Available | Negative | 2354074 - 2355012 | 34568.9 |
| glycerate 2-kinase | EGT48_12120 | Not Available | Negative | 2356520 - 2357665 | 39030.6 |
| 2-hydroxy-3-oxopropionate reductase | EGT48_12125 | Not Available | Negative | 2357762 - 2358652 | 30645.6 |
| 2-dehydro-3-deoxyglucarate aldolase | EGT48_12130 | Not Available | Negative | 2358682 - 2359452 | 27400.6 |
| mfs transporter | EGT48_12135 | Not Available | Negative | 2359468 - 2360802 | 48982.1 |
| d-galactarate dehydratase | EGT48_12140 | Not Available | Positive | 2361177 - 2362748 | 56390.9 |
| antitoxin prlf | EGT48_12145 | Not Available | Positive | 2362897 - 2363232 | 12322.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





