Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | EGT48_11880 | Not Available | Negative | 2305217 - 2306737 | 55039.9 |
| putrescine aminotransferase | EGT48_11885 | Not Available | Positive | 2307044 - 2308534 | 53855.5 |
| pp_02340 | EGT48_11890 | Not Available | Negative | 2308576 - 2308908 | Not Available |
| transcriptional regulator ebgr | EGT48_11895 | Not Available | Positive | 2309127 - 2310110 | 36252.6 |
| beta-galactosidase subunit alpha | EGT48_11900 | Not Available | Positive | 2310294 - 2313386 | 117860.0 |
| evolved beta-galactosidase subunit beta | EGT48_11905 | Not Available | Positive | 2313383 - 2313832 | 17457.6 |
| amino acid permease | EGT48_11910 | Not Available | Positive | 2313895 - 2315328 | 52175.7 |
| protein ygjj | EGT48_11915 | Not Available | Positive | 2315462 - 2316532 | 40289.8 |
| alpha-glucosidase | EGT48_11920 | Not Available | Positive | 2316549 - 2318900 | 88574.0 |
| nadph-dependent 2,4-dienoyl-coa reductase | EGT48_11925 | Not Available | Positive | 2319126 - 2321144 | 72675.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





