Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial-like protein | EGT48_11725 | Not Available | Positive | 2273536 - 2274099 | 19742.3 |
| fimbrial biogenesis outer membrane usher protein | EGT48_11730 | Not Available | Positive | 2274184 - 2276706 | 93418.1 |
| fimbrial assembly protein | EGT48_11735 | Not Available | Positive | 2276722 - 2277462 | 27369.4 |
| pilus assembly protein | EGT48_11740 | Not Available | Positive | 2277459 - 2278508 | 39385.3 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EGT48_11745 | Not Available | Negative | 2278562 - 2279215 | 23340.8 |
| accessory factor ubik family protein | EGT48_11750 | Not Available | Positive | 2279589 - 2279888 | 11397.8 |
| glycogen synthase | EGT48_11755 | Not Available | Negative | 2279923 - 2280123 | 7922.34 |
| duf1449 family protein | EGT48_11760 | Not Available | Positive | 2280393 - 2281022 | 23028.3 |
| flotillin family protein | EGT48_11765 | Not Available | Positive | 2281049 - 2282710 | 60711.1 |
| type i toxin-antitoxin system ibs family toxin | EGT48_11770 | Not Available | Positive | 2282950 - 2283009 | 2241.07 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





